When using JTAlert to log your contacts from WSJT-X to the Ham Radio Deluxe Logbook, there is an option for logging to an ADIF 3.1.0 Compliant logbook. This option needs to be "CHECKED" as shown below when logging to the HRD Logbook.
Also be sure to "CHECK" the Do not check or report logging success/failure Box 

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If you are missing the Worked B4 indicator, this is an issue in JTAlert.
See: THIS LINK

Always be sure you are on the Latest release.